bioMatrix.bioMatrix Class Reference

This class implements a matrix object designed to store the variance covariance matrix. More...

Inheritance diagram for bioMatrix.bioMatrix:

Public Member Functions
def	__init__ (self, dim, names, values)
	Constructor. More...
def	setvalue (self, rowname, colname, v)
	Set an entry of the matrix. More...
def	getvalue (self, rowname, colname)
	Get an entry of the matrix. More...
def	__str__ (self)
	Function called by the print statement.

Public Attributes
	dim
	Dimension of the (square) matrix.
	names
	keys
	matrix

Detailed Description

This class implements a matrix object designed to store the variance covariance matrix.

Definition at line 8 of file bioMatrix.py.

Constructor & Destructor Documentation

def bioMatrix.bioMatrix.__init__	(		self,
			dim,
			names,
			values
	)

Constructor.

Parameters

dim	Dimension of the (square) matrix
names	Array of dimension dim containing the names of the parameters
values	Two-dimensional array of dimension dim x dim containing the entries of the matrix

Example for the diagonal matrix

names = ["ASC_TRAIN","B_TIME","B_COST","ASC_CAR"]
values = [[7.0,0.0,0.0,0.0],[0.0,7.0,0.0,0.0],[0.0,0.0,7.0,0.0],[0.0,0.0,0.0,7.0]]
theMatrix = bioMatrix(4,names,values)

Definition at line 20 of file bioMatrix.py.

Member Function Documentation

def bioMatrix.bioMatrix.getvalue	(		self,
			rowname,
			colname
	)

Get an entry of the matrix.

Parameters

rowname	Name of the row
colname	Name of the column

Returns

Value

Definition at line 51 of file bioMatrix.py.

def bioMatrix.bioMatrix.setvalue	(		self,
			rowname,
			colname,
			v
	)

Set an entry of the matrix.

If it is an off-diagonal entry, the symmetric entry is set to the same value to maintain the symmetry of the matrix.

Parameters

rowname	Name of the row
colname	Name of the column
v	Value

Definition at line 43 of file bioMatrix.py.

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The documentation for this class was generated from the following file:

• bioMatrix.py